STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV53011.1Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
ALV54303.1
uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.948
ALV54493.1
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.925
ALV49767.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.866
ALV49669.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.846
ALV52911.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.822
ALV54654.1
DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.822
ALV50537.1
Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.815
ALV48926.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.811
ALV50904.1
DNA polymerase III subunit beta; Binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.801
ALV53012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.794
Your Current Organism:
Streptomyces sp. 4F
NCBI taxonomy Id: 1751294
Other names: S. sp. 4F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.