STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001464455_00340Unannotated protein. (256 aa)    
Predicted Functional Partners:
GCA_001464455_00341
Unannotated protein.
 
 0.998
GCA_001464455_00342
Unannotated protein.
 
 0.992
GCA_001464455_02305
Unannotated protein.
   
  0.936
GCA_001464455_02356
Unannotated protein.
   
  0.936
GCA_001464455_00800
Unannotated protein.
 
  
  0.872
GCA_001464455_00347
Unannotated protein.
  
  
 0.833
GCA_001464455_00413
Unannotated protein.
    
 0.801
GCA_001464455_03757
Unannotated protein.
    
  0.760
GCA_001464455_00068
Unannotated protein.
  
  0.713
GCA_001464455_03581
Unannotated protein.
 
  
  0.699
Your Current Organism:
Acidobacteria bacterium Ga0077534
NCBI taxonomy Id: 1752184
Other names: A. bacterium Ga0077534
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.