STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001464735_02096Unannotated protein. (204 aa)    
Predicted Functional Partners:
GCA_001464735_03444
Unannotated protein.
  
 
 0.975
GCA_001464735_03445
Unannotated protein.
    
  0.774
GCA_001464735_01747
Unannotated protein.
    
  0.753
GCA_001464735_02378
Unannotated protein.
 
  
  0.738
GCA_001464735_04026
Unannotated protein.
  
 
 0.709
GCA_001464735_02327
Unannotated protein.
  
     0.663
GCA_001464735_03067
Unannotated protein.
  
 
 0.646
GCA_001464735_03718
Unannotated protein.
    
  0.601
GCA_001464735_00008
Unannotated protein.
 
  
  0.569
GCA_001464735_03543
Unannotated protein.
    
 0.484
Your Current Organism:
Nitrospira sp. Ga0074138
NCBI taxonomy Id: 1752217
Other names: N. sp. Ga0074138, Nitrospirae bacterium Ga0074138
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.