STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001464505_01752Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_001464505_01751
Unannotated protein.
       0.773
GCA_001464505_02476
Unannotated protein.
    
   0.725
GCA_001464505_02675
Unannotated protein.
  
  
  0.708
GCA_001464505_02672
Unannotated protein.
  
  
  0.528
GCA_001464505_02051
Unannotated protein.
  
  
  0.520
GCA_001464505_01250
Unannotated protein.
  
  
  0.515
GCA_001464505_00919
Unannotated protein.
     
 0.512
GCA_001464505_01259
Unannotated protein.
  
  
  0.500
GCA_001464505_01514
Unannotated protein.
  
     0.442
GCA_001464505_02361
Unannotated protein.
   
   0.440
Your Current Organism:
Verrucomicrobia bacterium Ga0077533
NCBI taxonomy Id: 1752234
Other names: V. bacterium Ga0077533
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.