STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODR90635.1Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)    
Predicted Functional Partners:
ODR91876.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
ODR91925.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
ODR89003.1
Invasion associated locus B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
ODR91938.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
ODR90568.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
ODR90132.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
ODR89953.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
ODR89173.1
TIGR02301 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
ODR89870.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
ODR91843.1
Exopolysaccharide production negative regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
Your Current Organism:
Ensifer alkalisoli
NCBI taxonomy Id: 1752398
Other names: E. alkalisoli, Ensifer alkalisoli Li et al. 2016, Ensifer sp. YIC4009, Ensifer sp. YIC4027, Ensifer sp. YIC4031, Ensifer sp. YIC4032, HAMBI 3655, LMG 29286, LMG:29286, strain YIC4027
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.