STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2B1K2RIO1-domain-containing protein. (511 aa)    
Predicted Functional Partners:
A0A1Y2CGP9
Uncharacterized protein.
   
 0.999
A0A1Y2DZM5
Uncharacterized protein.
   
 0.996
A0A1Y2EQ39
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.996
A0A1Y2F1F3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.996
A0A1Y2AZC7
Bystin-domain-containing protein.
   
 0.994
A0A1Y2BZ62
DUF663-domain-containing protein.
   
 0.994
A0A1Y2DX81
Bystin.
   
 0.994
A0A1Y2ES72
DUF663-domain-containing protein.
   
 0.994
A0A1Y2AEL2
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
    
 0.993
A0A1Y2AR79
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.993
Your Current Organism:
Neocallimastix californiae
NCBI taxonomy Id: 1754190
Other names: G1, JMRC:SF:12176, N. californiae, Neocallimastix sp. G1, Neocallimastix sp. KS-2015
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