STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BS85Uncharacterized protein. (717 aa)    
Predicted Functional Partners:
A0A1Y2ECE6
SCD domain-containing protein.
   
 0.993
A0A1Y2AES3
WAPL domain-containing protein.
   
 0.991
A0A1Y1Z687
Double-strand-break repair protein rad21.
   
 0.989
A0A1Y1Z7E1
Rad21_Rec8 domain-containing protein.
   
 0.989
A0A1Y2F3M9
zf-C2H2_3 domain-containing protein.
   
 0.986
A0A1Y2CXM9
Uncharacterized protein.
   
 0.980
A0A1Y2DI82
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.980
A0A1Y2DIJ2
SMC hinge domain-containing protein.
   
 0.980
A0A1Y2F201
Smc hinge domain-containing protein.
   
 0.980
A0A1Y2F305
Uncharacterized protein.
   
 0.980
Your Current Organism:
Neocallimastix californiae
NCBI taxonomy Id: 1754190
Other names: G1, JMRC:SF:12176, N. californiae, Neocallimastix sp. G1, Neocallimastix sp. KS-2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.