STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D4C3Rhomboid-domain-containing protein. (358 aa)    
Predicted Functional Partners:
A0A1Y1Z3P3
Galactokinase.
    
  0.517
A0A1Y2AKV5
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.473
A0A1Y2B6G6
ATP-dependent metallopeptidase Hfl.
     
 0.463
A0A1Y2BZU8
ATP-dependent metallopeptidase Hfl.
     
 0.463
A0A1Y2DDJ8
ATP-dependent metallopeptidase Hfl.
     
 0.463
A0A1Y2AEN8
PHB domain-containing protein.
   
 0.400
A0A1Y2AEP6
PHB domain-containing protein.
   
 0.400
A0A1Y2AEQ4
PHB domain-containing protein.
   
 0.400
A0A1Y2AER2
PHB domain-containing protein.
   
 0.400
A0A1Y2AES0
PHB domain-containing protein.
   
 0.400
Your Current Organism:
Neocallimastix californiae
NCBI taxonomy Id: 1754190
Other names: G1, JMRC:SF:12176, N. californiae, Neocallimastix sp. G1, Neocallimastix sp. KS-2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.