STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DZN1WD40 repeat-like protein. (579 aa)    
Predicted Functional Partners:
A0A1Y2ELB2
Anti-silencing protein.
   
 
 0.987
A0A1Y2A3U2
Uncharacterized protein.
   
 
 0.982
A0A1Y2D9T4
Histone-binding protein RBBP7-like protein.
   
 
0.966
A0A1Y2EUW0
Histone-binding protein RBBP7-like protein.
   
 
0.966
A0A1Y2DIA0
WD40 repeat-like protein.
   
 
 0.959
A0A1Y2FHD2
WD40 repeat-like protein.
   
 
 0.959
A0A1Y2FSD9
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.957
A0A1Y2DBU6
Vezatin domain-containing protein.
   
 
 0.951
A0A1Y2EXN3
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.951
A0A1Y2EYN9
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.951
Your Current Organism:
Neocallimastix californiae
NCBI taxonomy Id: 1754190
Other names: G1, JMRC:SF:12176, N. californiae, Neocallimastix sp. G1, Neocallimastix sp. KS-2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.