STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EWA1P-loop containing nucleoside triphosphate hydrolase protein. (153 aa)    
Predicted Functional Partners:
A0A1Y2ETQ0
SRP-alpha_N domain-containing protein.
   
 0.985
A0A1Y2ETR4
SRP54-domain-containing protein.
   
 0.985
A0A1Y2D0Y1
Signal recognition particle, SRP19 subunit.
   
 
 0.963
A0A1Y2ESG4
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 
 0.963
A0A1Y1ZG63
SRP72 domain-containing protein.
    
 
 0.961
A0A1Y2AC89
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.946
A0A1Y2E5K7
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.946
A0A1Y2AUN6
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
   0.935
A0A1Y1ZKX0
Ribosomal protein L18e.
    
   0.874
A0A1Y2AJN9
Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.
    
   0.874
Your Current Organism:
Neocallimastix californiae
NCBI taxonomy Id: 1754190
Other names: G1, JMRC:SF:12176, N. californiae, Neocallimastix sp. G1, Neocallimastix sp. KS-2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.