STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F877Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
A0A1Y2F879
Sedlin.
    
 0.990
A0A1Y2DMC2
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.989
A0A1Y2BW78
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.988
A0A1Y1ZGV4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.981
A0A1Y2ERU6
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.981
A0A1Y2DAH5
Transport protein particle component.
   
 0.974
A0A1Y2F320
Transport protein particle component.
   
 0.974
A0A1Y2EZN8
Trafficking protein particle complex subunit BET3.
    
 0.972
A0A1Y2F5H8
Trafficking protein particle complex subunit BET3.
    
 0.972
A0A1Y2AQ58
Uncharacterized protein.
   
 0.971
Your Current Organism:
Neocallimastix californiae
NCBI taxonomy Id: 1754190
Other names: G1, JMRC:SF:12176, N. californiae, Neocallimastix sp. G1, Neocallimastix sp. KS-2015
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