STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VDW7Putative negative regulator sulfur controller-3; Belongs to the SKP1 family. (161 aa)    
Predicted Functional Partners:
A0A1Y1VL01
Ubiquitin ligase subunit.
   
 0.948
A0A1Y1VH12
WD40 repeat-like protein.
    
 0.941
A0A1Y1VK62
WD40 repeat-like protein.
    
 0.935
A0A1Y1UWJ1
Uncharacterized protein.
   
 0.926
A0A1Y1V7C7
CBN-NED-8 protein.
    
 0.879
A0A1Y1VJP8
RING/U-box.
   
 0.872
A0A1Y1VER3
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.870
A0A1Y1VDB6
WD40 repeat-like protein.
    
 0.864
A0A1Y1VFT3
Uncharacterized protein.
    
 0.861
A0A1Y1VM48
WD40 repeat-like protein.
    
 0.861
Your Current Organism:
Piromyces finnis
NCBI taxonomy Id: 1754191
Other names: Finn, JMRC:SF:12177, P. finnis, Piromyces sp. Finn, Piromyces sp. KS-2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.