Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1Y1UKU1 | A0A1Y1VVR4 | A0A1Y1UKU1 | A0A1Y1VVR4 | WD40 repeat-like protein. | Uncharacterized protein. | 0.585 |
A0A1Y1UKU1 | A0A1Y1WY39 | A0A1Y1UKU1 | A0A1Y1WY39 | WD40 repeat-like protein. | Deoxyuridine 5'-triphosphate nucleotidohydrolase. | 0.588 |
A0A1Y1UKU1 | A0A1Y1X7P9 | A0A1Y1UKU1 | A0A1Y1X7P9 | WD40 repeat-like protein. | Uncharacterized protein. | 0.925 |
A0A1Y1UKU1 | A0A1Y1XC43 | A0A1Y1UKU1 | A0A1Y1XC43 | WD40 repeat-like protein. | Uncharacterized protein. | 0.588 |
A0A1Y1VVR4 | A0A1Y1UKU1 | A0A1Y1VVR4 | A0A1Y1UKU1 | Uncharacterized protein. | WD40 repeat-like protein. | 0.585 |
A0A1Y1VVR4 | A0A1Y1WSX9 | A0A1Y1VVR4 | A0A1Y1WSX9 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.576 |
A0A1Y1VVR4 | A0A1Y1WTU1 | A0A1Y1VVR4 | A0A1Y1WTU1 | Uncharacterized protein. | Lipase_GDSL domain-containing protein. | 0.606 |
A0A1Y1VVR4 | A0A1Y1WY39 | A0A1Y1VVR4 | A0A1Y1WY39 | Uncharacterized protein. | Deoxyuridine 5'-triphosphate nucleotidohydrolase. | 0.604 |
A0A1Y1VVR4 | A0A1Y1WY73 | A0A1Y1VVR4 | A0A1Y1WY73 | Uncharacterized protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.640 |
A0A1Y1VVR4 | A0A1Y1X1G0 | A0A1Y1VVR4 | A0A1Y1X1G0 | Uncharacterized protein. | SAS-6_N domain-containing protein. | 0.606 |
A0A1Y1VVR4 | A0A1Y1X578 | A0A1Y1VVR4 | A0A1Y1X578 | Uncharacterized protein. | Retinoblastoma binding protein 4. | 0.585 |
A0A1Y1VVR4 | A0A1Y1X7P9 | A0A1Y1VVR4 | A0A1Y1X7P9 | Uncharacterized protein. | Uncharacterized protein. | 0.581 |
A0A1Y1VVR4 | A0A1Y1XC43 | A0A1Y1VVR4 | A0A1Y1XC43 | Uncharacterized protein. | Uncharacterized protein. | 0.604 |
A0A1Y1VVR4 | MED10 | A0A1Y1VVR4 | A0A1Y1XH96 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.574 |
A0A1Y1WSX9 | A0A1Y1VVR4 | A0A1Y1WSX9 | A0A1Y1VVR4 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.576 |
A0A1Y1WSX9 | A0A1Y1WTU1 | A0A1Y1WSX9 | A0A1Y1WTU1 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Lipase_GDSL domain-containing protein. | 0.659 |
A0A1Y1WSX9 | A0A1Y1X1G0 | A0A1Y1WSX9 | A0A1Y1X1G0 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | SAS-6_N domain-containing protein. | 0.659 |
A0A1Y1WSX9 | MED10 | A0A1Y1WSX9 | A0A1Y1XH96 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
A0A1Y1WTU1 | A0A1Y1VVR4 | A0A1Y1WTU1 | A0A1Y1VVR4 | Lipase_GDSL domain-containing protein. | Uncharacterized protein. | 0.606 |
A0A1Y1WTU1 | A0A1Y1WSX9 | A0A1Y1WTU1 | A0A1Y1WSX9 | Lipase_GDSL domain-containing protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.659 |
page 1 of 3