STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VWW1Peptidyl-tRNA hydrolase. (244 aa)    
Predicted Functional Partners:
A0A1Y1WS79
TLDc domain-containing protein.
    
  0.660
A0A1Y1VTD0
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
  
  
 0.621
A0A1Y1XEH5
LigT-like protein.
  
  
 0.621
A0A1Y1XP83
P-loop containing nucleoside triphosphate hydrolase protein.
  
  
 0.621
NCS6
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation.
  
  
 0.555
A0A1Y1XLB0
Adenine nucleotide alpha hydrolases-like protein.
  
  
 0.555
A0A1Y1WA37
Ankyrin.
    
  0.537
A0A1Y1XA33
Asparaginase-domain-containing protein.
    
  0.537
A0A1Y1XC34
Tyrosine--tRNA ligase.
  
  
 0.534
A0A1Y1X7J7
GMP synthase.
  
  
 0.471
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.