STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WDZ2PIN domain-like protein. (1615 aa)    
Predicted Functional Partners:
A0A1Y1X0M0
Uncharacterized protein.
   
 0.997
A0A1Y1X7Y1
Uncharacterized protein.
    
 0.990
A0A1Y1X9J2
DNA repair helicase rad25.
   
 0.981
A0A1Y1XA76
DNA repair helicase.
   
 0.957
A0A1Y1WZ47
ERCC4 domain-containing protein.
   
 0.937
A0A1Y1XF84
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.937
A0A1Y1U9Y7
Metallo-dependent phosphatase.
  
 0.925
A0A1Y1X790
Uncharacterized protein.
  
 0.922
A0A1Y1XF56
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.922
A0A1Y1W8J0
DNA repair protein.
    
 0.917
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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