A0A1Y1WJ48 protein (Anaeromyces robustus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y1WJ48

TPR-like protein. (614 aa)

Predicted Functional Partners:

A0A1Y1VY99

0.999

A0A1Y1WRQ2

0.999

A0A1Y1XAE6

0.999

A0A1Y1XGR8

0.999

A0A1Y1XIV1

0.999

A0A1Y1XM69

0.999

A0A1Y1XNI5

0.999

A0A1Y1X5Q9

0.997

A0A1Y1XD03

0.996

A0A1Y1XCD0

0.992

Your Current Organism:

Anaeromyces robustus

NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y1VY99	A0A1Y1WJ48	ANAPC5 domain-containing protein.	TPR-like protein.	0.999
A0A1Y1VY99	A0A1Y1WRQ2	ANAPC5 domain-containing protein.	APC1_C domain-containing protein.	0.999
A0A1Y1VY99	A0A1Y1X5Q9	ANAPC5 domain-containing protein.	TPR-like protein.	0.998
A0A1Y1VY99	A0A1Y1XAE6	ANAPC5 domain-containing protein.	RING/U-box.	0.999
A0A1Y1VY99	A0A1Y1XCD0	ANAPC5 domain-containing protein.	Mitotic checkpoint protein BUB3-like protein.	0.944
A0A1Y1VY99	A0A1Y1XD03	ANAPC5 domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.996
A0A1Y1VY99	A0A1Y1XGR8	ANAPC5 domain-containing protein.	Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.	0.994
A0A1Y1VY99	A0A1Y1XIV1	ANAPC5 domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
A0A1Y1VY99	A0A1Y1XM69	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.999
A0A1Y1VY99	A0A1Y1XNI5	ANAPC5 domain-containing protein.	TPR-like protein.	0.999
A0A1Y1WJ48	A0A1Y1VY99	TPR-like protein.	ANAPC5 domain-containing protein.	0.999
A0A1Y1WJ48	A0A1Y1WRQ2	TPR-like protein.	APC1_C domain-containing protein.	0.999
A0A1Y1WJ48	A0A1Y1X5Q9	TPR-like protein.	TPR-like protein.	0.997
A0A1Y1WJ48	A0A1Y1XAE6	TPR-like protein.	RING/U-box.	0.999
A0A1Y1WJ48	A0A1Y1XCD0	TPR-like protein.	Mitotic checkpoint protein BUB3-like protein.	0.992
A0A1Y1WJ48	A0A1Y1XD03	TPR-like protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.996
A0A1Y1WJ48	A0A1Y1XGR8	TPR-like protein.	Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.	0.999
A0A1Y1WJ48	A0A1Y1XIV1	TPR-like protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
A0A1Y1WJ48	A0A1Y1XM69	TPR-like protein.	Uncharacterized protein.	0.999
A0A1Y1WJ48	A0A1Y1XNI5	TPR-like protein.	TPR-like protein.	0.999