STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WPX3Coth-domain-containing protein. (1038 aa)    
Predicted Functional Partners:
A0A1Y1XPG0
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.619
A0A1Y1XE43
L domain-like protein.
    
  0.616
A0A1Y1XK91
L domain-like protein.
    
  0.616
A0A1Y1WZ47
ERCC4 domain-containing protein.
    
 0.613
A0A1Y1XL66
Sm-like ribonucleo protein.
    
 0.610
A0A1Y1X8B1
Small nuclear ribonucleo protein SmF.
    
  0.606
A0A1Y1U9E6
Small nuclear ribonucleoprotein G.
    
  0.605
A0A1Y1XDW5
ERCC4 domain-containing protein.
    
 0.580
A0A1Y1X324
Small nuclear ribonucleoprotein Sm D2.
    
 0.577
A0A1Y1W5U0
Ankyrin.
    
  0.574
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.