STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WVZ2Pectin lyase-like protein. (383 aa)    
Predicted Functional Partners:
A0A1Y1WU46
CBM1 domain-containing protein.
  
  
  0.790
A0A1Y1WXI7
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
   
 0.715
A0A1Y1X8G1
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
   
 0.715
A0A1Y1X8H3
S-phase kinase-associated protein 1A-like protein; Belongs to the SKP1 family.
   
 0.715
A0A1Y1X147
RING/U-box.
    
 0.707
A0A1Y1XK45
Transcription elongation factor B polypeptide 1-like protein; Belongs to the SKP1 family.
    
 0.694
A0A1Y1WVX8
Cullin-3A-like protein; Belongs to the cullin family.
    
 0.682
A0A1Y1WX01
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.682
A0A1Y1XBH7
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.682
A0A1Y1WX98
Pectin lyase-like protein.
 
 
 0.657
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.