A0A1Y1X081 protein (Anaeromyces robustus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y1X081

Transportin-2-like protein. (909 aa)

Predicted Functional Partners:

A0A1Y1XLM0

0.908

A0A1Y1WZI3

0.764

A0A1Y1VTI8

0.741

A0A1Y1XC69

0.703

A0A1Y1X475

0.699

A0A1Y1XEG1

0.699

A0A1Y1VTK4

0.675

A0A1Y1WRP5

0.675

A0A1Y1XCK4

0.675

A0A1Y1WPP9

0.674

Your Current Organism:

Anaeromyces robustus

NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y1VTI8	A0A1Y1VTK4	ARM repeat-containing protein.	Peptidase S59 domain-containing protein.	0.714
A0A1Y1VTI8	A0A1Y1WRP5	ARM repeat-containing protein.	Peptidase S59 domain-containing protein.	0.714
A0A1Y1VTI8	A0A1Y1WZI3	ARM repeat-containing protein.	ARM repeat-containing protein.	0.828
A0A1Y1VTI8	A0A1Y1X081	ARM repeat-containing protein.	Transportin-2-like protein.	0.741
A0A1Y1VTI8	A0A1Y1XC69	ARM repeat-containing protein.	Uncharacterized protein.	0.880
A0A1Y1VTI8	A0A1Y1XCK4	ARM repeat-containing protein.	ARM repeat-containing protein.	0.710
A0A1Y1VTI8	A0A1Y1XLM0	ARM repeat-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.942
A0A1Y1VTK4	A0A1Y1VTI8	Peptidase S59 domain-containing protein.	ARM repeat-containing protein.	0.714
A0A1Y1VTK4	A0A1Y1WZI3	Peptidase S59 domain-containing protein.	ARM repeat-containing protein.	0.466
A0A1Y1VTK4	A0A1Y1X081	Peptidase S59 domain-containing protein.	Transportin-2-like protein.	0.675
A0A1Y1VTK4	A0A1Y1XC69	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.851
A0A1Y1VTK4	A0A1Y1XCK4	Peptidase S59 domain-containing protein.	ARM repeat-containing protein.	0.733
A0A1Y1VTK4	A0A1Y1XLM0	Peptidase S59 domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.815
A0A1Y1WPP9	A0A1Y1X081	Uncharacterized protein.	Transportin-2-like protein.	0.674
A0A1Y1WPP9	A0A1Y1X475	Uncharacterized protein.	RNA-binding domain-containing protein.	0.745
A0A1Y1WPP9	A0A1Y1XC69	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A1Y1WPP9	A0A1Y1XEG1	Uncharacterized protein.	Uncharacterized protein.	0.745
A0A1Y1WRP5	A0A1Y1VTI8	Peptidase S59 domain-containing protein.	ARM repeat-containing protein.	0.714
A0A1Y1WRP5	A0A1Y1WZI3	Peptidase S59 domain-containing protein.	ARM repeat-containing protein.	0.466
A0A1Y1WRP5	A0A1Y1X081	Peptidase S59 domain-containing protein.	Transportin-2-like protein.	0.675