A0A1Y1X2K7 protein (Anaeromyces robustus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y1X2K7

Cysteine proteinase; Belongs to the peptidase C19 family. (745 aa)

Predicted Functional Partners:

A0A1Y1XJF3

0.969

A0A1Y1XEV8

0.958

A0A1Y1WU66

0.947

SUS1

0.946

A0A1Y1X2V7

0.944

A0A1Y1WR57

0.943

A0A1Y1XB26

0.943

A0A1Y1WRX5

0.941

A0A1Y1X8V5

0.918

A0A1Y1X9U6

0.914

Your Current Organism:

Anaeromyces robustus

NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1Y1WR57	A0A1Y1WRX5	A0A1Y1WR57	A0A1Y1WRX5	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.994
A0A1Y1WR57	A0A1Y1WU66	A0A1Y1WR57	A0A1Y1WU66	Uncharacterized protein.	FAT-domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.993
A0A1Y1WR57	A0A1Y1X2K7	A0A1Y1WR57	A0A1Y1X2K7	Uncharacterized protein.	Cysteine proteinase; Belongs to the peptidase C19 family.	0.943
A0A1Y1WR57	A0A1Y1X2V7	A0A1Y1WR57	A0A1Y1X2V7	Uncharacterized protein.	TFIID-31kDa-domain-containing protein.	0.999
A0A1Y1WR57	A0A1Y1X8V5	A0A1Y1WR57	A0A1Y1X8V5	Uncharacterized protein.	TFIID-18kDa-domain-containing protein.	0.993
A0A1Y1WR57	A0A1Y1X9U6	A0A1Y1WR57	A0A1Y1X9U6	Uncharacterized protein.	DUF1546-domain-containing protein.	0.994
A0A1Y1WR57	A0A1Y1XB26	A0A1Y1WR57	A0A1Y1XB26	Uncharacterized protein.	Putative TAF10-TFIID and SAGA subunit.	0.992
A0A1Y1WR57	A0A1Y1XEV8	A0A1Y1WR57	A0A1Y1XEV8	Uncharacterized protein.	SCA7-domain-containing protein.	0.985
A0A1Y1WR57	A0A1Y1XJF3	A0A1Y1WR57	A0A1Y1XJF3	Uncharacterized protein.	Ubiquitin-domain-containing protein.	0.859
A0A1Y1WR57	SUS1	A0A1Y1WR57	A0A1Y1XIS8	Uncharacterized protein.	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	0.972
A0A1Y1WRX5	A0A1Y1WR57	A0A1Y1WRX5	A0A1Y1WR57	SGF29 C-terminal domain-containing protein.	Uncharacterized protein.	0.994
A0A1Y1WRX5	A0A1Y1WU66	A0A1Y1WRX5	A0A1Y1WU66	SGF29 C-terminal domain-containing protein.	FAT-domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.994
A0A1Y1WRX5	A0A1Y1X2K7	A0A1Y1WRX5	A0A1Y1X2K7	SGF29 C-terminal domain-containing protein.	Cysteine proteinase; Belongs to the peptidase C19 family.	0.941
A0A1Y1WRX5	A0A1Y1X2V7	A0A1Y1WRX5	A0A1Y1X2V7	SGF29 C-terminal domain-containing protein.	TFIID-31kDa-domain-containing protein.	0.994
A0A1Y1WRX5	A0A1Y1X8V5	A0A1Y1WRX5	A0A1Y1X8V5	SGF29 C-terminal domain-containing protein.	TFIID-18kDa-domain-containing protein.	0.994
A0A1Y1WRX5	A0A1Y1X9U6	A0A1Y1WRX5	A0A1Y1X9U6	SGF29 C-terminal domain-containing protein.	DUF1546-domain-containing protein.	0.978
A0A1Y1WRX5	A0A1Y1XB26	A0A1Y1WRX5	A0A1Y1XB26	SGF29 C-terminal domain-containing protein.	Putative TAF10-TFIID and SAGA subunit.	0.973
A0A1Y1WRX5	A0A1Y1XEV8	A0A1Y1WRX5	A0A1Y1XEV8	SGF29 C-terminal domain-containing protein.	SCA7-domain-containing protein.	0.977
A0A1Y1WRX5	SUS1	A0A1Y1WRX5	A0A1Y1XIS8	SGF29 C-terminal domain-containing protein.	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	0.982
A0A1Y1WU66	A0A1Y1WR57	A0A1Y1WU66	A0A1Y1WR57	FAT-domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.993