STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)    
Predicted Functional Partners:
A0A1Y1XHH3
Ribosomal protein L31e.
  
 
 0.997
A0A1Y1XQ43
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.996
A0A1Y1XQV3
60S ribosomal protein L30-like protein.
   
 
 0.995
A0A1Y1WX43
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.993
A0A1Y1XQ86
Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.992
A0A1Y1VTL0
Ribosomal protein L34e.
  
 
 0.991
A0A1Y1XAT5
Ribosomal protein L24.
  
 
 0.990
A0A1Y1VTC1
L30e-like protein.
   
 
 0.989
A0A1Y1WZX4
TRASH domain-containing protein.
   
 
 0.989
A0A1Y1XFF2
Ribos_L4_asso_C domain-containing protein.
   
 
 0.989
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.