STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1X8U3Radical SAM enzyme. (455 aa)    
Predicted Functional Partners:
A0A1Y1VTN7
Acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.854
A0A1Y1WZ35
Class II aaRS and biotin synthetase.
  
 
 0.835
A0A1Y1X6D1
P-loop containing nucleoside triphosphate hydrolase protein.
     0.806
A0A1Y1WPI2
Serine palmitoyltransferase 1.
  
 
 0.794
A0A1Y1XJ48
Serine palmitoyltransferase.
  
 
 0.794
A0A1Y1UW98
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.746
A0A1Y1VRM1
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.746
A0A1Y1XAS7
SGNH hydrolase.
    
 0.745
A0A1Y1WRZ8
Carbamoyl-phosphate synth.
  
 
 0.692
A0A1Y1WUJ4
Large subunit of carbamoyl-phosphate synthase.
  
 
 0.692
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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