STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1X8W2TPR-like protein. (617 aa)    
Predicted Functional Partners:
A0A1Y1W0H6
Uncharacterized protein.
  
 
 0.954
A0A1Y1XKC9
Uncharacterized protein.
   
   0.937
A0A1Y1XFZ6
RRM domain-containing protein.
   
 
 0.929
A0A1Y1WZQ6
Uncharacterized protein.
   
 
 0.926
A0A1Y1WVI0
Zf-U1-domain-containing protein.
   
 
 0.919
A0A1Y1X7A3
U2 small nuclear ribonucleo protein a.
    
 
 0.918
A0A1Y1WVW1
Sm domain-containing protein.
    
 
 0.915
A0A1Y1WPL0
Splicing factor 3B subunit 1.
   
 
 0.885
A0A1Y1WQ48
Nuclear cap-binding protein subunit 2.
    
 
 0.880
A0A1Y1VVZ2
LUC7-domain-containing protein.
   
 
 0.874
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.