STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XA45Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (438 aa)    
Predicted Functional Partners:
A0A1Y1WQ27
Leo1-domain-containing protein.
   
 0.981
A0A1Y1X7Z4
Uncharacterized protein.
   
 0.906
A0A1Y1XFV6
Uncharacterized protein.
    
 0.906
A0A1Y1XEG7
WD40 repeat-like protein.
   
 0.901
A0A1Y1WSN6
MRG-domain-containing protein.
   
 0.890
A0A1Y1UKU1
WD40 repeat-like protein.
   
 0.885
A0A1Y1X578
Retinoblastoma binding protein 4.
   
 0.885
A0A1Y1WZX5
HDAC_interact domain-containing protein.
   
 0.880
A0A1Y1XMR5
HDAC_interact domain-containing protein.
   
 0.880
A0A1Y1WUY6
FAD/NAD(P)-binding domain-containing protein.
   
 0.878
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.