STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XEI1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)    
Predicted Functional Partners:
A0A1Y1WQ07
RPB5 subunit of DNA-directed RNA polymerase.
   
 0.999
A0A1Y1WTM2
Uncharacterized protein.
   
 0.999
A0A1Y1X0Y7
RNA polymerase.
   
 0.999
A0A1Y1X7P0
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.999
A0A1Y1XA46
Uncharacterized protein.
   
 0.999
A0A1Y1XNZ6
Uncharacterized protein.
   
 0.999
A0A1Y1XPV0
Uncharacterized protein.
   
 0.998
A0A1Y1VQX4
Uncharacterized protein.
   
 0.997
A0A1Y1XQQ9
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.996
A0A1Y1WU29
RPOL4c domain-containing protein.
   
 0.995
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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