STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XHC8Family 16 glycoside hydrolase. (256 aa)    
Predicted Functional Partners:
A0A1Y1WYH9
RNI-like protein.
    
 0.915
A0A1Y1XM38
ARF/SAR superfamily; Belongs to the small GTPase superfamily. Arf family.
    
 0.877
A0A1Y1XGQ3
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 0.736
A0A1Y1X9G9
TBCC-domain-containing protein.
    
 0.679
A0A1Y1WS07
Cytoskeleton associated protein-like protein 1.
    
 0.632
A0A1Y1XB88
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.623
A0A1Y1XM15
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
    
 
 0.623
A0A1Y1XF08
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.619
A0A1Y1WZ28
DNA-binding protein.
    
   0.550
A0A1Y1X583
DNA-binding protein.
    
   0.550
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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