STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XMK6DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (448 aa)    
Predicted Functional Partners:
A0A1Y1X8T4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.926
A0A1Y1X2M5
Uncharacterized protein.
    
 0.917
A0A1Y1XB50
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
    
 0.896
A0A1Y1XKC9
Uncharacterized protein.
    
 
 0.849
A0A1Y1WTA3
Uncharacterized protein.
  
 
 0.839
A0A1Y1XG64
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.823
A0A1Y1WY77
F1 complex, gamma subunit of ATPase.
  
 
 0.814
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.812
A0A1Y1WYE3
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
  
0.808
A0A1Y1XKR3
ATP-synt_DE_N domain-containing protein.
   
   0.788
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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