STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XNI4Coproporphyrinogen III oxidase. (487 aa)    
Predicted Functional Partners:
A0A1Y1WNB3
S-adenosyl-L-methionine-dependent methyltransferase.
   
 
 0.752
A0A1Y1XCJ6
S4 RNA-binding domain-containing protein.
   
 
 0.752
A0A1Y1WGB7
Oxidoreductase family protein.
   
 
 0.602
A0A1Y1VQ31
Uncharacterized protein.
   
 
 0.595
A0A1Y1XN91
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
  
 0.567
A0A1Y1X8E1
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
  
    0.525
A0A1Y1XC34
Tyrosine--tRNA ligase.
   
 
 0.516
A0A1Y1XML9
Cytochrome b5; Belongs to the cytochrome b5 family.
   
  
 0.490
A0A1Y1X5Q3
Caltractin.
   
 
 0.477
A0A1Y1XM87
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
  
 0.476
Your Current Organism:
Anaeromyces robustus
NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4
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