A0A1Y1XR74 protein (Anaeromyces robustus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y1XR74

Translation elongation factor. (346 aa)

Predicted Functional Partners:

A0A1Y1WE16

0.999

A0A1Y1VQD6

0.984

A0A1Y1XIV2

0.984

A0A1Y1XEC3

0.966

A0A1Y1XM80

0.921

A0A1Y1WWQ8

0.912

RPS1

0.906

A0A1Y1XR50

0.904

A0A1Y1XQH4

0.902

A0A1Y1WIV7

0.895

Your Current Organism:

Anaeromyces robustus

NCBI taxonomy Id: 1754192
Other names: A. robustus, Anaeromyces sp. KS-2015, Anaeromyces sp. S4, JMRC:SF:12178, S4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1Y1VQD6	A0A1Y1WE16	A0A1Y1VQD6	A0A1Y1WE16	Response regulatory domain-containing protein.	Glutathione S-transferase domain-containing protein.	0.480
A0A1Y1VQD6	A0A1Y1XIV2	A0A1Y1VQD6	A0A1Y1XIV2	Response regulatory domain-containing protein.	Response regulatory domain-containing protein.	0.875
A0A1Y1VQD6	A0A1Y1XR50	A0A1Y1VQD6	A0A1Y1XR50	Response regulatory domain-containing protein.	Tr-type G domain-containing protein.	0.984
A0A1Y1VQD6	A0A1Y1XR74	A0A1Y1VQD6	A0A1Y1XR74	Response regulatory domain-containing protein.	Translation elongation factor.	0.984
A0A1Y1WE16	A0A1Y1VQD6	A0A1Y1WE16	A0A1Y1VQD6	Glutathione S-transferase domain-containing protein.	Response regulatory domain-containing protein.	0.480
A0A1Y1WE16	A0A1Y1WIV7	A0A1Y1WE16	A0A1Y1WIV7	Glutathione S-transferase domain-containing protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.928
A0A1Y1WE16	A0A1Y1WWQ8	A0A1Y1WE16	A0A1Y1WWQ8	Glutathione S-transferase domain-containing protein.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.960
A0A1Y1WE16	A0A1Y1XEC3	A0A1Y1WE16	A0A1Y1XEC3	Glutathione S-transferase domain-containing protein.	Uncharacterized protein.	0.999
A0A1Y1WE16	A0A1Y1XIV2	A0A1Y1WE16	A0A1Y1XIV2	Glutathione S-transferase domain-containing protein.	Response regulatory domain-containing protein.	0.480
A0A1Y1WE16	A0A1Y1XM80	A0A1Y1WE16	A0A1Y1XM80	Glutathione S-transferase domain-containing protein.	Peptide chain release factor eRF/aRF subunit 1.	0.693
A0A1Y1WE16	A0A1Y1XQH4	A0A1Y1WE16	A0A1Y1XQH4	Glutathione S-transferase domain-containing protein.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.959
A0A1Y1WE16	A0A1Y1XR50	A0A1Y1WE16	A0A1Y1XR50	Glutathione S-transferase domain-containing protein.	Tr-type G domain-containing protein.	0.999
A0A1Y1WE16	A0A1Y1XR74	A0A1Y1WE16	A0A1Y1XR74	Glutathione S-transferase domain-containing protein.	Translation elongation factor.	0.999
A0A1Y1WE16	RPS1	A0A1Y1WE16	A0A1Y1X0X2	Glutathione S-transferase domain-containing protein.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.938
A0A1Y1WIV7	A0A1Y1WE16	A0A1Y1WIV7	A0A1Y1WE16	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Glutathione S-transferase domain-containing protein.	0.928
A0A1Y1WIV7	A0A1Y1WWQ8	A0A1Y1WIV7	A0A1Y1WWQ8	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999
A0A1Y1WIV7	A0A1Y1XEC3	A0A1Y1WIV7	A0A1Y1XEC3	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.890
A0A1Y1WIV7	A0A1Y1XM80	A0A1Y1WIV7	A0A1Y1XM80	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Peptide chain release factor eRF/aRF subunit 1.	0.814
A0A1Y1WIV7	A0A1Y1XQH4	A0A1Y1WIV7	A0A1Y1XQH4	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
A0A1Y1WIV7	A0A1Y1XR50	A0A1Y1WIV7	A0A1Y1XR50	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Tr-type G domain-containing protein.	0.895