STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWV49955.1Short chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)    
Predicted Functional Partners:
KWV49956.1
Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.669
KWV50472.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.631
KWV60148.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.496
KWV60449.1
Acetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.489
KWV60962.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.486
KWV44455.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.477
KWV60448.1
acetyl-CoA--acetoacetyl-CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.457
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
       0.447
KWV49957.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.422
KWV44454.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.416
Your Current Organism:
Bradyrhizobium macuxiense
NCBI taxonomy Id: 1755647
Other names: B. macuxiense, Bradyrhizobium sp. BR 10303, HAMBI:3602, strain BR 10303
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.