STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176605_01267Unannotated protein. (160 aa)    
Predicted Functional Partners:
GCA_900176605_00585
Unannotated protein.
  
 0.670
GCA_900176605_00804
Unannotated protein.
 
  
 0.595
GCA_900176605_00805
Unannotated protein.
 
 
  0.589
GCA_900176605_00966
Unannotated protein.
 
 
  0.588
GCA_900176605_00806
Unannotated protein.
    
 0.544
GCA_900176605_01268
Unannotated protein.
       0.539
GCA_900176605_01263
Unannotated protein.
   
 0.524
GCA_900176605_01266
Unannotated protein.
 
     0.490
GCA_900176605_00578
Unannotated protein.
 
  
 0.457
GCA_900176605_00588
Unannotated protein.
  
  0.453
Your Current Organism:
Peptoniphilus vaginalis
NCBI taxonomy Id: 1756987
Other names: CSUR:P0125, DSM:101742, P. vaginalis, Peptoniphilus sp. KhD- 2, strain KhD-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.