STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001542905_00217Unannotated protein. (357 aa)    
Predicted Functional Partners:
GCA_001542905_01394
Unannotated protein.
 
 0.999
GCA_001542905_03230
Unannotated protein.
 
 0.999
GCA_001542905_01393
Unannotated protein.
 
 
 0.992
GCA_001542905_03229
Unannotated protein.
 
 
 0.992
GCA_001542905_00223
Unannotated protein.
 
 
 0.991
GCA_001542905_00224
Unannotated protein.
 
 0.986
GCA_001542905_02941
Unannotated protein.
  
  
  0.895
GCA_001542905_02612
Unannotated protein.
  
  
  0.877
GCA_001542905_00218
Unannotated protein.
 
     0.869
GCA_001542905_00897
Unannotated protein.
  
  
  0.864
Your Current Organism:
Halorubrum aethiopicum
NCBI taxonomy Id: 1758255
Other names: H. aethiopicum, Halorubrum aethiopicum Gibtan et al. 2018, Halorubrum sp. SAH-A6, JCM 31519, KCCM 43215, strain SAH-A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.