STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001542905_02506Unannotated protein. (221 aa)    
Predicted Functional Partners:
GCA_001542905_02507
Unannotated protein.
 0.999
GCA_001542905_00953
Unannotated protein.
   
 
 0.840
GCA_001542905_00482
Unannotated protein.
    
 0.821
GCA_001542905_00906
Unannotated protein.
    
 0.821
GCA_001542905_02088
Unannotated protein.
  
 
 0.820
GCA_001542905_02288
Unannotated protein.
  
 
 0.820
GCA_001542905_02505
Unannotated protein.
       0.819
GCA_001542905_01174
Unannotated protein.
 
  
 
0.681
GCA_001542905_00302
Unannotated protein.
  
  
 
0.648
GCA_001542905_00811
Unannotated protein.
  
  
 
0.648
Your Current Organism:
Halorubrum aethiopicum
NCBI taxonomy Id: 1758255
Other names: H. aethiopicum, Halorubrum aethiopicum Gibtan et al. 2018, Halorubrum sp. SAH-A6, JCM 31519, KCCM 43215, strain SAH-A6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.