STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTE49566.1Signal peptidase II; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)    
Predicted Functional Partners:
ileS
isoleucine--tRNA ligase; IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; Derived by automated computational analysis using gene prediction [...]
  
  
 0.933
KTE49567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.817
KTE49565.1
Bifunctional riboflavin kinase/FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.740
KTE49563.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.588
KTE50168.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.541
KTE49609.1
Phosphoribosylaminoimidazole carboxylase; With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
KTE49564.1
Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
KTE53061.1
Trigger factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.495
KTE50223.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.475
KTE52159.1
Phosphoglucosamine mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.471
Your Current Organism:
Sphingopyxis sp. H073
NCBI taxonomy Id: 1759079
Other names: S. sp. H073
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