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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSIN_0100Sucrose permease, major facilitator superfamily. (390 aa)    
Predicted Functional Partners:
SSIN_0780
Para-aminobenzoate synthase, aminase component; Aminodeoxychorismate lyase.
   
 
 0.724
SSIN_0330
Competence-stimulating peptide ABC transporter permease protein ComB.
  
 0.644
SSIN_1371
Clumping factor B.
  
 0.644
SSIN_0102
Competence protein CoiA.
       0.563
SSIN_0239
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Plasmin(ogen) receptor; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.541
SSIN_0099
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
       0.520
pheA
Prephenate dehydratase.
  
 
  0.519
SSIN_0892
Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.
  
  
  0.453
Your Current Organism:
Streptococcus sinensis
NCBI taxonomy Id: 176090
Other names: CCUG 48363, CCUG 48488, DSM 14990, LMG 21517, LMG:21517, S. sinensis, Streptococcus sinensis Woo et al. 2002, strain HKU4
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