STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSIN_0331Hydroxymethylpyrimidine ABC transporter, ATPase component. (242 aa)    
Predicted Functional Partners:
SSIN_0332
Hydroxymethylpyrimidine ABC transporter, substrate-binding component.
 
 0.999
SSIN_0333
Hydroxymethylpyrimidine ABC transporter, transmembrane component.
 0.999
SSIN_0334
Hypothetical protein.
 
    0.932
potA
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
  0.634
SSIN_0278
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
    
  0.632
SSIN_0277
ABC transporter, periplasmic spermidine putrescine-binding protein PotD; TCDB 3.A.1.11.1.
    
  0.630
SSIN_1133
Hypothetical protein.
  
 
 0.552
SSIN_1582
Hypothetical protein; FIG00514634.
  
 
 0.552
SSIN_0279
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
    
  0.545
SSIN_1045
ABC transporter, predicted N-acetylneuraminate transport system permease protein 1.
    
  0.501
Your Current Organism:
Streptococcus sinensis
NCBI taxonomy Id: 176090
Other names: CCUG 48363, CCUG 48488, DSM 14990, LMG 21517, LMG:21517, S. sinensis, Streptococcus sinensis Woo et al. 2002, strain HKU4
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