Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSIN_0484Hypothetical protein. (101 aa)    
Predicted Functional Partners:
SSIN_0485
Hypothetical protein.
       0.773
SSIN_0483
Hypothetical protein; FIG01119828.
       0.672
SSIN_1260
Bacterocin transport accessory protein.
    
   0.596
SSIN_1506
Thioredoxin; Belongs to the thioredoxin family.
    
   0.596
SSIN_1714
Thioredoxin; Belongs to the thioredoxin family.
    
   0.596
SSIN_0196
Endo-beta-N-acetylglucosaminidase.
   
 
  0.474
SSIN_1445
Hypothetical protein.
   
 
  0.474
SSIN_1446
Hypothetical protein.
   
 
  0.474
SSIN_1761
Hypothetical protein; FIG01115988.
   
 
  0.474
SSIN_0735
Hypothetical protein.
  
 
 0.441
Your Current Organism:
Streptococcus sinensis
NCBI taxonomy Id: 176090
Other names: CCUG 48363, CCUG 48488, DSM 14990, LMG 21517, LMG:21517, S. sinensis, Streptococcus sinensis Woo et al. 2002, strain HKU4
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