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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSIN_0983ABC-transporter (ATP-binding protein) -possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide. (402 aa)    
Predicted Functional Partners:
SSIN_0984
Rhamnose-containing polysacharide translocation permease.
 
  
 0.983
SSIN_0982
Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase.
 
   
 0.879
SSIN_0240
ABC transporter permease protein.
  
 0.843
SSIN_0985
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase.
 
     0.840
SSIN_0986
Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase.
     
 0.790
SSIN_0556
Glutamine ABC transporter, glutamine-binding protein/permease protein.
    
 0.736
SSIN_0849
Amino acid ABC transporter, glutamine-binding protein/permease protein.
    
 0.736
SSIN_0981
Lipoteichoic acid synthase LtaS Type IIc.
       0.700
SSIN_0989
Lipopolysaccharide biosynthesis protein.
     0.697
SSIN_0988
Membrane protein; Related to Actinobacillus protein.
 
     0.642
Your Current Organism:
Streptococcus sinensis
NCBI taxonomy Id: 176090
Other names: CCUG 48363, CCUG 48488, DSM 14990, LMG 21517, LMG:21517, S. sinensis, Streptococcus sinensis Woo et al. 2002, strain HKU4
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