Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SSIN_0989Lipopolysaccharide biosynthesis protein. (977 aa)    
Predicted Functional Partners:
SSIN_0988
Membrane protein; Related to Actinobacillus protein.
 
     0.877
SSIN_0992
Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.842
SSIN_0990
Glycosyl transferase, family 2.
 
 
  0.838
SSIN_0987
Glycosyltransferase.
 
     0.819
SSIN_1888
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase.
 
 
 0.777
SSIN_0993
Glycosyl transferase family 8.
  
 
 0.769
SSIN_0985
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase.
 
 
0.766
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.764
SSIN_0984
Rhamnose-containing polysacharide translocation permease.
 
  
 0.727
SSIN_0991
Glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase.
       0.721
Your Current Organism:
Streptococcus sinensis
NCBI taxonomy Id: 176090
Other names: CCUG 48363, CCUG 48488, DSM 14990, LMG 21517, LMG:21517, S. sinensis, Streptococcus sinensis Woo et al. 2002, strain HKU4
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