STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSIN_1427Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr; Subfamily F2 (as in PMID19099556). (397 aa)    
Predicted Functional Partners:
SSIN_1428
Acetyltransferase.
     
 0.783
SSIN_1429
ATPase YjeE, predicted to have essential role in cell wall biosynthesis.
       0.782
SSIN_0068
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.507
recF
DNA recombination and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
  
     0.500
SSIN_1002
Signal peptidase I; Belongs to the peptidase S26 family.
 
     0.500
SSIN_0079
Late competence protein ComEA, DNA receptor.
 
     0.470
SSIN_0459
Cell division protein FtsI, Peptidoglycan synthetase.
  
     0.447
SSIN_1430
Guanine-hypoxanthine permease.
       0.444
SSIN_0853
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
 
  
 0.418
Your Current Organism:
Streptococcus sinensis
NCBI taxonomy Id: 176090
Other names: CCUG 48363, CCUG 48488, DSM 14990, LMG 21517, LMG:21517, S. sinensis, Streptococcus sinensis Woo et al. 2002, strain HKU4
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