Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSIN_1817ABC transporter ATP-binding protein. (221 aa)    
Predicted Functional Partners:
SSIN_1816
ABC transporter permease.
 
 0.995
SSIN_0967
ABC transporter permease protein.
 0.981
SSIN_1209
ABC transporter permease protein.
 0.976
SSIN_1020
ABC transporter permease protein.
 
 0.820
SSIN_0441
Hypothetical protein; FIG01116942.
  
  0.774
SSIN_0969
Periplasmic component of efflux system.
  
 0.728
SSIN_1211
Periplasmic component of efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.728
SSIN_1382
ABC transporter permease protein.
  
  0.707
SSIN_0241
ABC transporter, ATP-binding protein.
 
  
  0.705
SSIN_0520
ABC transporter permease protein.
  
 0.674
Your Current Organism:
Streptococcus sinensis
NCBI taxonomy Id: 176090
Other names: CCUG 48363, CCUG 48488, DSM 14990, LMG 21517, LMG:21517, S. sinensis, Streptococcus sinensis Woo et al. 2002, strain HKU4
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