Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SSIN_2009Major facilitator superfamily transporter-permease. (383 aa)    
Predicted Functional Partners:
SSIN_2008
Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family.
       0.855
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.689
SSIN_0330
Competence-stimulating peptide ABC transporter permease protein ComB.
 
  0.615
SSIN_0780
Para-aminobenzoate synthase, aminase component; Aminodeoxychorismate lyase.
   
 
 0.566
SSIN_1371
Clumping factor B.
  
  0.520
SSIN_0644
Prephenate dehydrogenase.
  
  
  0.519
SSIN_2007
Transcriptional regulator OrfX.
       0.511
SSIN_0239
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Plasmin(ogen) receptor; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.463
SSIN_0843
Acetolactate synthase small subunit.
     
  0.429
rpsO
SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.411
Your Current Organism:
Streptococcus sinensis
NCBI taxonomy Id: 176090
Other names: CCUG 48363, CCUG 48488, DSM 14990, LMG 21517, LMG:21517, S. sinensis, Streptococcus sinensis Woo et al. 2002, strain HKU4
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