STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_0073Cyclic beta-1,2-glucan synthetase. (2824 aa)    
Predicted Functional Partners:
SAMN02949497_0378
Endoglucanase.
    
 0.938
SAMN02949497_4463
Tfp pilus assembly protein PilF.
  
 0.889
SAMN02949497_1831
Phosphomannomutase.
   
 0.887
SAMN02949497_3816
Glycosyltransferase involved in cell wall bisynthesis.
    
 0.883
SAMN02949497_3817
Glycosyltransferase involved in cell wall bisynthesis.
    
 0.883
SAMN02949497_0585
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.878
SAMN02949497_2066
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
  
 
 0.878
SAMN02949497_2073
Polysaccharide deacetylase.
  
 
 0.878
SAMN02949497_2327
Polysaccharide deacetylase.
  
 
 0.878
SAMN02949497_2411
DUF3298 domain-containing protein.
  
 
 0.878
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.