STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_0355Uncharacterized protein, contains a NRPS condensation (Elongation) domain. (450 aa)    
Predicted Functional Partners:
SAMN02949497_0656
Amino acid adenylation domain-containing protein.
 
 
 0.975
SAMN02949497_4281
Flp pilus assembly protein TadD, contains TPR repeats.
  
 
 0.959
SAMN02949497_0528
Amino acid adenylation domain-containing protein.
 
 
 0.954
SAMN02949497_0141
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
 
 
 0.942
SAMN02949497_0497
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
 
 0.933
SAMN02949497_0498
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
 
 0.933
SAMN02949497_0532
Acyl transferase domain-containing protein.
 
 
 0.933
SAMN02949497_0496
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
 
 0.932
SAMN02949497_0530
Acyl transferase domain-containing protein.
 
 
 0.931
SAMN02949497_0527
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.929
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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