STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_0769Von Willebrand factor type A domain-containing protein. (510 aa)    
Predicted Functional Partners:
SAMN02949497_0768
PAS domain S-box-containing protein.
 
     0.827
SAMN02949497_0770
Uncharacterized protein.
       0.781
SAMN02949497_4275
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
  0.769
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
  0.765
SAMN02949497_1880
Cytochrome c, mono-and diheme variants.
    
  0.741
SAMN02949497_0771
Metallo-beta-lactamase superfamily protein.
 
     0.733
SAMN02949497_3004
Ferredoxin-NADP reductase.
   
 
  0.721
SAMN02949497_4537
Methane monooxygenase component C.
   
 
  0.721
SAMN02949497_3326
HD-like signal output (HDOD) domain, no enzymatic activity.
  
     0.614
SAMN02949497_2550
HD-like signal output (HDOD) domain, no enzymatic activity.
  
     0.600
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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