STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_1068Alkaline phosphatase D. (515 aa)    
Predicted Functional Partners:
SAMN02949497_0373
Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
 
 0.952
folE
GTP cyclohydrolase 1.
    
 0.903
SAMN02949497_4259
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.889
SAMN02949497_4429
Glycerophosphoryl diester phosphodiesterase.
  
 
 0.824
SAMN02949497_3200
Riboflavin biosynthesis protein; Belongs to the ribF family.
     
 0.623
SAMN02949497_1067
UPF0502 protein SAMN02949497_1067; Belongs to the UPF0502 family.
       0.527
SAMN02949497_1839
Di-haem cytochrome c peroxidase.
  
     0.494
SAMN02949497_0849
Phenylacetate-CoA ligase.
  
     0.490
SAMN02949497_0132
Choline-sulfatase.
    
  0.475
SAMN02949497_3847
Arylsulfatase.
    
  0.475
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.