STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_1670Uncharacterized protein. (142 aa)    
Predicted Functional Partners:
SAMN02949497_3870
Hemolysin-type calcium-binding repeat-containing protein.
 
 0.895
SAMN02949497_1671
Uncharacterized protein.
 
 
 
0.859
SAMN02949497_1672
Uncharacterized protein.
 
    
0.780
SAMN02949497_1674
Uncharacterized phage protein gp47/JayE.
       0.755
SAMN02949497_1673
Uncharacterized protein.
       0.751
SAMN02949497_1675
Uncharacterized protein YmfQ in lambdoid prophage, DUF2313 family.
       0.751
SAMN02949497_0378
Endoglucanase.
 
 
 0.735
SAMN02949497_3467
Microcystin-dependent protein.
 
 
   0.679
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.675
SAMN02949497_0861
FecR family protein.
  
 
 0.657
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.