STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_1750Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
SAMN02949497_1751
B30.2/SPRY domain-containing protein.
       0.773
SAMN02949497_1752
Uncharacterized protein.
       0.773
SAMN02949497_1753
Uncharacterized phage protein gp47/JayE.
       0.773
SAMN02949497_1754
Uncharacterized protein.
       0.773
SAMN02949497_1755
Phage tail-collar fibre protein.
       0.762
SAMN02949497_1756
Uncharacterized protein.
       0.762
SAMN02949497_1757
Uncharacterized protein.
       0.762
SAMN02949497_1746
Uncharacterized protein.
       0.718
SAMN02949497_1747
Lysozyme.
       0.718
SAMN02949497_1748
Lysozyme.
       0.718
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.