STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_2379Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (194 aa)    
Predicted Functional Partners:
SAMN02949497_2380
YCII domain-containing protein.
       0.819
SAMN02949497_2381
BolA protein; Belongs to the BolA/IbaG family.
  
    0.737
SAMN02949497_2378
Uncharacterized protein.
       0.686
cmoA
Carboxy-S-adenosyl-L-methionine synthase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
   
    0.664
SAMN02949497_2382
Peptidylprolyl isomerase.
       0.658
SAMN02949497_1807
Predicted lipid-binding transport protein, Tim44 family.
  
    0.584
SAMN02949497_2377
DUF1244 domain-containing protein.
       0.522
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.476
msrB
Peptide methionine sulfoxide reductase MsrB.
  
    0.470
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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