Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SAMN02949497_0762 | SAMN02949497_4592 | SAMN02949497_0762 | SAMN02949497_4592 | Uncharacterized protein. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.891 |
| SAMN02949497_0762 | htpX | SAMN02949497_0762 | SAMN02949497_2849 | Uncharacterized protein. | Protease HtpX; Belongs to the peptidase M48B family. | 0.579 |
| SAMN02949497_1786 | htpX | SAMN02949497_1786 | SAMN02949497_2849 | Membrane protein TerC, possibly involved in tellurium resistance. | Protease HtpX; Belongs to the peptidase M48B family. | 0.698 |
| SAMN02949497_1805 | htpX | SAMN02949497_1805 | SAMN02949497_2849 | Modulator of FtsH protease; Belongs to the BI1 family. | Protease HtpX; Belongs to the peptidase M48B family. | 0.630 |
| SAMN02949497_2847 | clpS | SAMN02949497_2847 | SAMN02949497_2848 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.996 |
| SAMN02949497_2847 | grpE | SAMN02949497_2847 | SAMN02949497_3629 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.872 |
| SAMN02949497_2847 | htpX | SAMN02949497_2847 | SAMN02949497_2849 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | Protease HtpX; Belongs to the peptidase M48B family. | 0.706 |
| SAMN02949497_2847 | lon | SAMN02949497_2847 | SAMN02949497_1048 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.762 |
| SAMN02949497_3176 | SAMN02949497_4592 | SAMN02949497_3176 | SAMN02949497_4592 | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.980 |
| SAMN02949497_3176 | htpX | SAMN02949497_3176 | SAMN02949497_2849 | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | Protease HtpX; Belongs to the peptidase M48B family. | 0.671 |
| SAMN02949497_4144 | grpE | SAMN02949497_4144 | SAMN02949497_3629 | UPF0716 protein FxsA. | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.491 |
| SAMN02949497_4144 | htpX | SAMN02949497_4144 | SAMN02949497_2849 | UPF0716 protein FxsA. | Protease HtpX; Belongs to the peptidase M48B family. | 0.601 |
| SAMN02949497_4592 | SAMN02949497_0762 | SAMN02949497_4592 | SAMN02949497_0762 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Uncharacterized protein. | 0.891 |
| SAMN02949497_4592 | SAMN02949497_3176 | SAMN02949497_4592 | SAMN02949497_3176 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.980 |
| SAMN02949497_4592 | htpX | SAMN02949497_4592 | SAMN02949497_2849 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Protease HtpX; Belongs to the peptidase M48B family. | 0.770 |
| clpS | SAMN02949497_2847 | SAMN02949497_2848 | SAMN02949497_2847 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.996 |
| clpS | htpX | SAMN02949497_2848 | SAMN02949497_2849 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Protease HtpX; Belongs to the peptidase M48B family. | 0.559 |
| grpE | SAMN02949497_2847 | SAMN02949497_3629 | SAMN02949497_2847 | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.872 |
| grpE | SAMN02949497_4144 | SAMN02949497_3629 | SAMN02949497_4144 | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | UPF0716 protein FxsA. | 0.491 |
| grpE | htpX | SAMN02949497_3629 | SAMN02949497_2849 | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | Protease HtpX; Belongs to the peptidase M48B family. | 0.667 |
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